Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798825.1_cds_XP_016462062.1_5496
CDS Infomation

[gene=LOC107785289] [db_xref=GeneID:107785289] [protein=probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X3] [protein_id=XP_016462062.1] [location=complement(join(6834..7033,8275..8575,9312..9635,11121..11518,11615..12398))] [gbkey=CDS]
Sequence

ATGGCATCTTTTCCTCTTGTTTCAAATGAAAGATTATTAGTTTCTCACAAGAAATGGCAG
CCCCATCTTGGAAAGTTTGAACCTTTAATTAGATTCAAGAATCAATCTTGCTCATTATCC
AATTCTTGTTTTACCTCAAGTTGTGTGCCTTTGTTGGGGTTGAATTATAGATTGTATAAA
TCTCAATGTAATTACAAGAAATGGATGGTCCATTTTGGAATTTTTGAACCTTTAAAGAGA
TTCAAGAATCTATCTTGCTCATTTTCCAATTCTTGTTTTGGGTTGAATTATAGGTTCTGT
AAATCTCAGAGTAGAATACTACTTTGTAGTACTGGGGTTAGGTCACTGGTAAATGAGAAG
GGAGATATAGAAACCCATTTGAACAAAACAGAAAGTAATGATATTCGTAGGAAGTTTTCG
TTGAGATTGAGACCAAGGCTAAGATTATTGTCAAGAAGGTTGAAAAGGGTGTCTGTTAAA
TCTATGTTAAATGATTTTGGCAAGTTTTTGAGGAAGAATACAAGAAGAGTGACACTGTCA
ACTTCAATTTCAGTGGTATTGGGCTTGTGCTATTTGTTTCTTAGATTGACAGCAACACCT
TCTCCAAAGGTTGTTCCATATTCAGACTTGATTACTAGTCTTCAGGGAGGGTCTGTAACA
AAGGTTCAATTTGAGGAAGGCACGCGGCGTATTTACTACAATACAAACTTCAGTAGTCTT
AAGAATGTTCAGACAGGTGAAGCTAGTTCCTTAGTTCCTGTTGAAAGCGCGGCTGTTCAG
ACAGGTGAAGATAGTTCCTTAGTTCCTGCTGAAAGCGCGACCATAATTGAGGAAAGCAAA
GATATAGATAGCAATAAAGGTGGGAGGAGTAAAATGTCAACAGCCCAACCTGTATGGCAG
TTTTCTACGAGGAAGATCGATCACGATGAAGGGTATCTTCTTAGTCTAATGAGGGAAAAG
GGAACGGCATATGGCTCAGCCCCTCAATCAGCACTTATGTCGATTAGGAGCTTATTGATT
ACTATCTTAACTTTATGGATTCCTTTGACTCCTTTAATGTGGCTTCTCTATCGTCAACTT
TCTGCTGCCAATAGTCCTGCAAAAAAACGAAAACCAAGTAACCAGGTGGTTGGCTTTAAT
GATGTCGAGGGTGTGGATGCTGCAAAAGTCGAACTTATGGAGATAGTATTGTGTCTGCAA
GGAGCTATAAACTTCAGTAAACTAGGGGCGAAGTTACCAAGAGGTGTACTGCTTGTAGGT
CCACCTGGCACAGGAAAAACGTTGCTAGCTCGTGCAGTGGCAGGAGAAGCAGGACTACCC
TTTTTTTCCGTTTCTGCTAGTGAATTTGTTGAAATGTTTGTTGGAAGAGGAGCAGCTCGC
ATTAGAGACCTTTTTAGCGTGGCAAGAAAGAATGCTCCATCAATCATTTTTATTGACGAA
CTTGATGCTGTCGGAGGAAAGCGCGGAAGGAGTTTCAATGATGAAAGAGACCAAACTTTG
AATCAGTTGCTTACGGAGATGGATGGCTTTGACTCAGACTTGAACATCATTGTAATTGCT
GCAACTAATAGACCAGAAGCTCTGGATCCAGCTTTATGTCGGCCTGGACGTTTCTCCAGG
AAAATTTTAGTCGGTGAACCAGATGAAGATGGAAGGAGAAAGATCCTGGCCGTACACTTA
AGAGGAGTGCCCCTTGAGGAAGACCTGGAGCTTGTGTGTGACCTGGTTGCATCTCTTACT
CAAGGCTTTGTAGGTGCTGACCTTGCTAACATTGTCAACGAAGCTGCTTTACTAGCTGCA
CGCAGAGGGGCTGATTCTGTCTCAAGGGAAGACATAATGGAATCCATAGAAAGAGCAAAA
TTTGGGATAAATGACAAGCAATTTAGCCAAGGTACAATAGGCAAGGAACTGGAAAAACTA
TTCCCCTGGGTTCCTTCTTTCATGAGGAGGAATAATATGAGAAGTGATGCGATGCAAGGA
CCTTTGGGGTATCAAACACTCAGCTGA

Peptide Sequence

PEP ID

XP_016462062.1
PEP Infomation

PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X3 [Nicotiana tabacum]
Sequence

MASFPLVSNERLLVSHKKWQPHLGKFEPLIRFKNQSCSLSNSCFTSSCVPLLGLNYRLYK
SQCNYKKWMVHFGIFEPLKRFKNLSCSFSNSCFGLNYRFCKSQSRILLCSTGVRSLVNEK
GDIETHLNKTESNDIRRKFSLRLRPRLRLLSRRLKRVSVKSMLNDFGKFLRKNTRRVTLS
TSISVVLGLCYLFLRLTATPSPKVVPYSDLITSLQGGSVTKVQFEEGTRRIYYNTNFSSL
KNVQTGEASSLVPVESAAVQTGEDSSLVPAESATIIEESKDIDSNKGGRSKMSTAQPVWQ
FSTRKIDHDEGYLLSLMREKGTAYGSAPQSALMSIRSLLITILTLWIPLTPLMWLLYRQL
SAANSPAKKRKPSNQVVGFNDVEGVDAAKVELMEIVLCLQGAINFSKLGAKLPRGVLLVG
PPGTGKTLLARAVAGEAGLPFFSVSASEFVEMFVGRGAARIRDLFSVARKNAPSIIFIDE
LDAVGGKRGRSFNDERDQTLNQLLTEMDGFDSDLNIIVIAATNRPEALDPALCRPGRFSR
KILVGEPDEDGRRKILAVHLRGVPLEEDLELVCDLVASLTQGFVGADLANIVNEAALLAA
RRGADSVSREDIMESIERAKFGINDKQFSQGTIGKELEKLFPWVPSFMRRNNMRSDAMQG
PLGYQTLS

Transcript Sequence

Gene sequence data has not been registered.